austraits.build
austraits.build copied to clipboard
traitecoevo
Source for AusTraits
for example for plant height we're using currently ```{r} library(austraits) library(tidyverse) austraits % join_all)$traits %>% filter(taxon_name %in% c("Acacia longifolia","Acacia suaveolens")) %>% filter(trait_name == "plant_height") %>% filter(life_stage=="adult" & basis_of_record %in% c("field","literature","literature,...
- [ ] RBGSYD_2014_2 has a combined `toothed_or_lobed` trait value for `leaf_margin`. The workshop group has agreed that this is lumping two traits, the leaf margin shape (toothed) and the...
The function `move_values_to_new_trait` has two tweaks required to be cleaner. First, it currently requires that we have a separate line of code before running the trait, that creates a new...
We want a function to recode either - a trait_name - (for categorical traits) a trait value The function would scan across the likely places and update accordingly. **For trait...
A series of small changes to be made to the taxonomic names matching protocol: - [ ] Use string search-and-replace to update wording: 1. For hybrids, if pattern ` x...
Function `strip_names()` needs to only remove `var` if it is an entire word, not just matching letters. Same true for the other patterns being removed. For instance, ``` > s...
There were a number of cases where a taxon name was automatically changes from an APNI-accepted name (usually Orchids) to a quite similar APC-accepted name that was in a completely...
We should come up with a systematic way to attribute people who've contributed ideas or coding to a GitHub commit. Right now, we add each other as `co-authors` if we've...
This correctly gives a list of all references, formatted: ``` austraits$sources ``` This correctly gives a list of all dataset_ids: ``` View(austraits$sources) ``` However, if you try and explore individual...
- [ ] Function to add "filtering columns" for duplicates. Function should ask for `dataset_id`, list of traits to filter, and (maybe) list of studies to filter. Output would be...