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Interests about python implementation

Open HelloWorldLTY opened this issue 10 months ago • 6 comments

Hi, thanks for your great work. Considering many single-cell methods are developed also in python, I wonder if you have plan to extend your design to Python platform. Thanks a lot.

HelloWorldLTY avatar Apr 16 '24 01:04 HelloWorldLTY

Thanks for your interest in propr.

Unfortunately I do not have the capacity to migrate this library into Python and to maintain two separate instances of the software. Given the number of features bundled into propr, I think migration would be a significant undertaking.

However, there are pieces of propr that could be implemented in Python quite easily -- depending on which parts of the software you want to use. If you let me know what feature(s) is most useful to you, I may be able to advise on how you could lift the code into an equivalent numpy calculation.

tpq avatar Apr 16 '24 23:04 tpq

I see, thanks a lot. I have implemented propr by myself. Thx.

HelloWorldLTY avatar Apr 19 '24 00:04 HelloWorldLTY

@HelloWorldLTY I would be interested.

SilasK avatar Jun 03 '24 14:06 SilasK

@HelloWorldLTY @SilasK Have you managed to do that?

suzannejin avatar Jul 02 '24 15:07 suzannejin

Hi, I used to implement one python version, I can upload the code later. Thanks for your interests.

HelloWorldLTY avatar Jul 02 '24 18:07 HelloWorldLTY

Could you please try this implementation:

https://github.com/HelloWorldLTY/propr_python/tree/main

And share your questions or experiences with me? Thanks.

HelloWorldLTY avatar Jul 03 '24 02:07 HelloWorldLTY