neuroimaging topic

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

rordenlab

Brain Imaging Analysis Kit

brainiak

:warning: OBSOLETE | Multi-platform, free open source software for visualization and image computing.

Slicer

Multi-platform, free open source software for visualization and image computing.

Slicer

Workflows and interfaces for neuroimaging packages

nipy

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

nipreps

TE-dependent analysis of multi-echo fMRI

ME-ICA

Framework for the reproducible processing of neuroimaging data with deep learning methods

aramis-lab

Deep Learning Toolkit for Medical Image Analysis

DLTK

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

nipreps