molecule-generation topic
CORE
CORE: Automatic Molecule Optimization using Copy & Refine Strategy (AAAI 2020)
GDSS
Official Code Repository for the paper "Score-based Generative Modeling of Graphs via the System of Stochastic Differential Equations" (ICML 2022)
GeoLDM
Geometric Latent Diffusion Models for 3D Molecule Generation
DrugAssist
DrugAssist: A Large Language Model for Molecule Optimization
MolDiff
MolDiff: Addressing the Atom-Bond Inconsistency Problem in 3D Molecule Diffusion Generation
biochemical-lms-for-drug-design
Code for the paper "Exploiting Pretrained Biochemical Language Models for Targeted Drug Design", to appear in Bioinformatics, Proceedings of ECCB2022.
posebusters
Plausibility checks for generated molecule poses.
rlmolecule
A reinforcement learning library for material and molecule optimization
MGVAE
Multiresolution Equivariant Graph Variational Autoencoder (MGVAE) https://arxiv.org/abs/2106.00967
Data-Centric-Transfer
[NeurIPS'23] Source code of "Data-Centric Learning from Unlabeled Graphs with Diffusion Model": A data-centric transfer learning framework with diffusion model on graphs.