molecular-simulation topic

List molecular-simulation repositories

chap

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CHAP is a tool for the functional annotation of ion channel structures:

Str2Str

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Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)

PyBILT

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Toolkit to aid in the analysis of lipid bilayer molecular simulation trajectories.

molecular-ts

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Virtual chemistry simultaion. Visualization of the behavior of particles in 2D and 3D space. Artifical life research.