histopathology topic

List histopathology repositories

tiatoolbox

348
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Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

Patch-GCN

103
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29
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Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

Pathology-GAN

90
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20
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Corresponding code of 'Quiros A.C., Murray-Smith R., Yuan K. Pathology GAN: Learning deep representations of cancer tissue. Proceedings of The 3rd International Conference on Medical Imaging with Deep...

champkit

37
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3
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Benchmarking toolkit for patch-based histopathology image classification.

wsi-preprocessing

48
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13
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Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning

SISH

90
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26
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Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering

PyHIST

55
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13
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A pipeline to segment tissue from the background in histological images

torchstain

107
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20
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Stain normalization tools for histological analysis and computational pathology

demo_wsi_superres

20
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5
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WSISR: Single image super-resolution for Whole slide Imaging using convolutional neural networks and self-supervised color normalization.