iCount

iCount copied to clipboard

I am using mm9 annotation file. I found that some gene ids occur in multiple locations. This causes the following error. Traceback (most recent call last): File "/data/groups/anko/mohamed/Install_packages/miniconda3/envs/env_nf/lib/python3.9/site-packages/iCount/cli.py", line 444,...

mohamedbahru

I got the following error when I did the iCount segment step? File "/data/groups/anko/mohamed/Install_packages/miniconda3/envs/env_nf/lib/python3.9/site-packages/iCount/genomes/segment.p y", line 465, in _process_transcript_group assert starts == sorted(starts) AssertionError I was trying to find the...

mohamedbahru

Help with installation

1

Hi, I am currently trying to install via source inside a virtual env using : `git clone https://github.com/tomazc/iCount` `cd iCount` `pip install -e .` The installation seems to be successful...

valerieT1998