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Whether the input sequence can be mRNA sequence when gff3 file is given for a new species genome?

2

Hi, I have cloned this software locally and want to run for a new species genome. I want to know whether the mRNA sequence not each exon sequence for an...

The ID attribute of CDS and exon features in the output gff3 is missing

1

Dear, When I correct the gff3 annotation with the gffread (v0.12.6), the ID attributes of CDS and exon in the output results will be lost. How can we maintain this...

NCBI gbff file to fasta

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Dear, The gbff file in NCBI usually have follows format. There is all the sequence will be output when using `any2fasta` command, but how to just output the CDS sequence?...