Tinyi Chu

You are welcome. On Thu, Jan 20, 2022 at 6:40 PM Moh Huda ***@***.***> wrote: > Dear Tinyi, > > Finally, now I manage to make the function updated. I...

Hi Dustin, I am not sure if my previous email reply passed through. In case if it didn't, I am pasting my reply here. "Hi Dustin, Thank you for your...

Hi Dustin, Thank you for your interest in our work. Sample size of the bulk RNA-seq generally should not be an issue, as in the first (initial) Gibbs sampling step,...

Could you print the head(rownames(ref.dat)), head(colnames(ref.dat)), head(rownames(X)), head(colnames(X)) ? I suspect that it might be caused by an unmatched input data format. Thanks. On Sun, Aug 22, 2021 at 1:41...

I suspect that it was caused by the issue that your input was dataframe rather than matrix type. Try converting them to matrix using as.matrix. On Sun, Aug 22, 2021...

please see the vignette.pdf for details. please let me know if there are any questions. On Wed, Aug 25, 2021 at 12:11 AM xzhouaw ***@***.***> wrote: > Thanks! I used...

Dear Kristoffer, Thank you very much for your feedback. In theory, Mistake 1 should not happen, as TED allows all zero genes in the input, which will not affect the...

Hi Kristoffer , Mistake 2 and 3 are now precluded in the latest release. Feel free to let me know if there are any additional questions/suggestions. Best, Tinyi On Fri,...

Hi Thomas, Thank you for your suggestions. I will force a conversion to character in the next update. Best, Tinyi On Tue, Jun 29, 2021 at 10:30 AM Thomas Mitchell...

Hi Vincent, I have now fixed this issue - something I forgot to do after adding the random seed that addresses Tom's request. In our BayesPrism paper, we provided phi.tum...