Tim Treis

Logger should mention from which function it's triggered

1

Since we're chaining calls, these events can come out of any of these functions. I think the logger should mention the function? Wdyt @Sonja-Stockhaus ?

Coloring by AnnData in `render_labels` is insanely slow

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When I call ``` fig, ax = plt.subplots(ncols=1, nrows=1, figsize=(4, 4)) ( sdata_sample2 .pl.render_labels( "filtered_hexes", # color="B_cells", table_name="morphology_filtered", ) .pl.show(ax=ax) ) ``` the plot takes about 15 s, when I...

waiting for SpatialData release

`make_tiles` doesn't copy transformations from the image it took as input

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### Report ### Versions ```python v1.7.0 ```

### Report `make_tiles` function always places the tiles in the `global` coordinate system, should be coordinate_system of the image ### Versions ```python v1.7.0 ```

### Report ``` sq.experimental.im.make_tiles( sdata=LIB6253127_sdata_right, image_key="LIB6253127_full_image_right", center_grid_on_tissue=True, tissue_mask_key="LIB6253127_full_image_right_tissue", tile_size=(224, 224), preview=True ) ``` yields ``` INFO Saved tile grid as 'sdata.shapes["LIB6253127_full_image_right_tiles"]' INFO After tissue filtering: 24570[/](https://vscode-remote+ssh-002dremote-002b7b22686f73744e616d65223a2267707573727635302e736369646f6d2e6465222c2275736572223a2274696d2e7472656973222c22706f7274223a383030307d.vscode-resource.vscode-cdn.net/)56980 (43.12%) tiles are fully...

Functions to QC histopathology images

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**IMPORTANT: Please search among the [Pull requests](../pulls) before creating one.** ## Description ## How has this been tested? ## Closes