Andreas Tille

Results 210 comments of Andreas Tille

On Wed, Oct 09, 2019 at 09:14:50AM -0700, Jeet Sukumaran wrote: > And I see now that the issue is with test code itself and not the data? Yes, its...

Any news about this? It becomes even more urgent after the release of Debian 10. Now Python2 code is actively removed from Debian. Kind regards, Andreas.

That's fine. BTW, I realised an old code copy of pyyaml. Do you think you could simply use official pyyaml (which is at version 5.1 now)? This would be really...

On Wed, Sep 11, 2019 at 03:18:48AM -0700, Mikkel Schubert wrote: > I've already replaced that copy with a dependency on ruamel.yaml in the development branch, based on your previous...

> I am working on this now along with an overhaul of parts of the program. > > I realize that you would probably prefer a smaller update that just...

Any news for the py3x branch. Is it somehow usable? We really want to get rid of all python2 pysam dependencies and Paleomix is one of the two remaining ones.

Unfortunately there is no newer release than 1.2.14 (which is Python2).

Hi Mikkel, is there any progress with a Palemomix version that works with Python3? Debian is agressively removing Python2 code and once Paleomix might be removed from Debian it is...

On Sun, Aug 16, 2020 at 12:49:31PM -0700, Mikkel Schubert wrote: > My current goal is to have a python3 version of PALEOMIX ready before next month. > The other,...

Thanks a lot. That's really great news. I nearly finished the Debian package. When doing so I changed shebang lines in all scripts. Feel free to download and apply the...