Tiago Bruno Rezende de Castro

I don't understand, it still does not work. Which version of sleuth am I supposed to use? The error changed after I restarted R.

@LineWulff Did you manage to figure this out? I also have experienced the opposite direction to known trajectory experiments.

Any thoughts regarding this? Or does it makes no sense? What are the assumption regarding the direction of the arrows?

I suggest reading all the supplementary note 2 (considerations for accurate determination and visualization of RNA velocity) of the RNA velocity publication. All of these questions are addressed there.

Did you manage to fix this? What type of computer are you using?

Yes, I solved the problem. Check my post in another issue within the pagoda2 package. https://github.com/hms-dbmi/pagoda2/issues/72

it is very slow for me on M1

Woow that was easy! Thanks!

I use this code to list the top notes with unchecked tasks, but it counts alternate checkboxes as non-completed. How can I make it also count alternat checkboxes as completed?...

Same issue here. I can't expand any snippets.