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Published 20 hours ago • verified publisher icon thibautjombart

Screeplot() function for sPCA is extremely slow.

Open cms2775 opened this issue 1 year ago • 0 comments

Hi,

I'm currently running the sPCA function in Adegenet with a very large dataset (aroud 120 samples and 40,000 SNPs). The spca function works fine and generates the correct output when run for about a day on our server. However, when I call the screeplot() function on my spca object, It appears to start the entire calculation over and ran for about a day before stalling. Is there an alternative?

cms2775 avatar Mar 24 '23 05:03 cms2775