Theo Sanderson

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Oh man, I don't think I'm going to be able to sort this out right now, sorry. The magnets are the Amazon ones above. The coil I got out of...

Wow super cool! So from my application point of view this is probably overkill and I might not invest the extra time but again really really don't focus on my...

Hey! Thanks so much for doing this measurement! I'm definitely happy to give some of this a go - and the off-axis illumination does from other work sound like a...

Hi @NicolaDM , if you are supplying metadata we need to know how to match up the metadata to the node names in the tree. This needs you either to...

I really suspect your metadata file does have genuinely duplicated entries in the key column - there isn't any complex logic in the code on prefixes or anything. Feel free...

Hi Nicola, How are you making your TSV? Here I have replaced the tabs with pipes for clarity ``` node|collapsedTo|mutationsInf|Ns|errors SRR11578335|||5297-5586,22878-23144|| ``` You'll see that the first line has 4...

Reopening to consider change to avoid the same confusion in future

A related issue is that we don't currently parse branch / node annotations from Nexus files (https://github.com/theosanderson/taxonium/issues/461). Nexus is a basic implementation that just reads the tree. But if one...

The initial Nexus thing is hopefully resolved