ehrapy
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theislab
Electronic Health Record Analysis with Python.
### Description of feature I volunteered to model all cases where it works and doesn't work. Based on this we want to make an informed decision whether we can just...
**PR Checklist** - [ ] This comment contains a description of changes (with reason) - [ ] Referenced issue is linked - [ ] If you've fixed a bug or...
### Description of feature We currently have three issues (#637, #649, #662) dealing with how we determine feature types and the downstream problems that arise due to different approaches. I'll...
### Report > /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/__init__.py:12: in > from ehrapy import data as dt > /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/data/__init__.py:1: in > from ehrapy.data._datasets import ( > /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/data/_datasets.py:6: in > from ehrapy.io._read import read_csv, read_fhir, read_h5ad...
### Description of feature The datasets for testing are currently distributed within the specific tests. A less redundant, clearer and easier to do maintenance solution is to have them as...
### Description of feature https://github.com/DynamicTimeWarping/dtw-python
### Description of feature The discussion on whether we want to distinguish between ordinal and nominal categorical features in ehrapy was raised while calculating feature correlations as part of the...
Add a new type of plot. Sankey diagrams based on transitions such as time. We might have to use Plotly for this: https://plotly.com/python/sankey-diagram/
**PR Checklist** - [ ] This comment contains a description of changes (with reason) - [ ] Referenced issue is linked - [ ] If you've fixed a bug or...
### Description of feature Calculate it automatically. Would allow us to reduce the number of methods