dca
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theislab
Deep count autoencoder for denoising scRNA-seq data
I am running into trouble using this package, tried different versions of keras, tensorflow ect. yet various errors still pop up. Can anyone who is using the package successfully kindly...
Hello, I am trying to install dca but keep getting errors related to keras. Which dca, keras, tensorflow versions to use?
I tried installing dca using conda, pip3 and I am getting the following error when I try to load the package. I am using vscode for my scripting. ------------------- from...
I am very interested in the dca, but tensorflow version is complicated, could you provide pytorch version for more researchers.
 I cannot find dca code in the tutorial page. Could you please fix it? Thanks a lot!
When I try to apply `--hyper` I get an empty architecture structure and no output file here is the message after the empty output: [] Traceback (most recent call last):...
 I have tried to enable eager execution, but then another error said DCA needs tensorflow V2+. BTW, if I use --checkcounts, another error asks me to make sure my...
always being "Solving environment", Please make a runnable environment through conda or docker to let the paper be more worthy !!!
Hi, I ran dca with scanpy and checked the maximum value of the matrix, np.max(adata_imputed.X) 185.14267 which is even smaller than the original raw counts' maximum np.max(adata.layers["counts"]) 296 How shall...
I am trying to run your application from the command line in its most basic form ('_dca input.tsv outputdir_'), however the output directory does not contain the 'mean_norm.tsv' mentioned in...
