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ERROR: No .egg-info directory found when install with pip

Open FessenSimon opened this issue 3 weeks ago • 0 comments

...ERROR: No .egg-info directory found, it appeared when I was installing cellrank with pip

...!pip install cellrank
...Collecting cellrank
  Using cached cellrank-2.0.4-py3-none-any.whl.metadata (8.0 kB)
Requirement already satisfied: anndata>=0.9 in d:\anaconda\lib\site-packages (from cellrank) (0.10.5.post1)
Requirement already satisfied: docrep>=0.3.0 in d:\anaconda\lib\site-packages (from cellrank) (0.3.2)
Requirement already satisfied: joblib>=0.13.1 in d:\anaconda\lib\site-packages (from cellrank) (1.2.0)
Requirement already satisfied: matplotlib>=3.5.0 in d:\anaconda\lib\site-packages (from cellrank) (3.7.2)
Requirement already satisfied: networkx>=2.2 in d:\anaconda\lib\site-packages (from cellrank) (2.8.8)
Requirement already satisfied: numba!=0.57.0,>=0.51.0 in d:\anaconda\lib\site-packages (from cellrank) (0.59.1)
Requirement already satisfied: numpy>=1.22.0 in d:\anaconda\lib\site-packages (from cellrank) (1.26.4)
Requirement already satisfied: pandas>=1.5.0 in c:\users\xuanjiechen\appdata\roaming\python\python311\site-packages (from cellrank) (2.2.2)
Requirement already satisfied: pygam>=0.8.0 in d:\anaconda\lib\site-packages (from cellrank) (0.9.1)
Collecting pygpcca>=1.0.4 (from cellrank)
  Using cached pygpcca-1.0.4-py3-none-any.whl.metadata (10 kB)
Requirement already satisfied: scanpy>=1.7.2 in d:\anaconda\lib\site-packages (from cellrank) (1.10.1)
Requirement already satisfied: scikit-learn>=0.24.0 in d:\anaconda\lib\site-packages (from cellrank) (1.3.0)
Requirement already satisfied: scipy>=1.2.0 in d:\anaconda\lib\site-packages (from cellrank) (1.11.1)
Collecting scvelo>=0.2.5 (from cellrank)
  Using cached scvelo-0.3.2-py3-none-any.whl.metadata (8.6 kB)
Requirement already satisfied: seaborn>=0.10.0 in d:\anaconda\lib\site-packages (from cellrank) (0.13.2)
Requirement already satisfied: wrapt>=1.12.1 in d:\anaconda\lib\site-packages (from cellrank) (1.14.1)
Requirement already satisfied: array-api-compat in d:\anaconda\lib\site-packages (from anndata>=0.9->cellrank) (1.4.1)
Requirement already satisfied: h5py>=3 in d:\anaconda\lib\site-packages (from anndata>=0.9->cellrank) (3.9.0)
Requirement already satisfied: natsort in d:\anaconda\lib\site-packages (from anndata>=0.9->cellrank) (8.4.0)
Requirement already satisfied: packaging>=20 in d:\anaconda\lib\site-packages (from anndata>=0.9->cellrank) (23.1)
Requirement already satisfied: six in d:\anaconda\lib\site-packages (from docrep>=0.3.0->cellrank) (1.16.0)
Requirement already satisfied: contourpy>=1.0.1 in d:\anaconda\lib\site-packages (from matplotlib>=3.5.0->cellrank) (1.0.5)
Requirement already satisfied: cycler>=0.10 in d:\anaconda\lib\site-packages (from matplotlib>=3.5.0->cellrank) (0.11.0)
Requirement already satisfied: fonttools>=4.22.0 in d:\anaconda\lib\site-packages (from matplotlib>=3.5.0->cellrank) (4.25.0)
Requirement already satisfied: kiwisolver>=1.0.1 in d:\anaconda\lib\site-packages (from matplotlib>=3.5.0->cellrank) (1.4.4)
Requirement already satisfied: pillow>=6.2.0 in d:\anaconda\lib\site-packages (from matplotlib>=3.5.0->cellrank) (9.4.0)
Requirement already satisfied: pyparsing<3.1,>=2.3.1 in d:\anaconda\lib\site-packages (from matplotlib>=3.5.0->cellrank) (3.0.9)
Requirement already satisfied: python-dateutil>=2.7 in d:\anaconda\lib\site-packages (from matplotlib>=3.5.0->cellrank) (2.8.2)
Requirement already satisfied: llvmlite<0.43,>=0.42.0dev0 in d:\anaconda\lib\site-packages (from numba!=0.57.0,>=0.51.0->cellrank) (0.42.0)
Requirement already satisfied: pytz>=2020.1 in d:\anaconda\lib\site-packages (from pandas>=1.5.0->cellrank) (2023.3.post1)
Requirement already satisfied: tzdata>=2022.7 in d:\anaconda\lib\site-packages (from pandas>=1.5.0->cellrank) (2023.3)
Requirement already satisfied: progressbar2<5.0.0,>=4.2.0 in d:\anaconda\lib\site-packages (from pygam>=0.8.0->cellrank) (4.4.2)
Collecting jinja2==3.0.3 (from pygpcca>=1.0.4->cellrank)
  Using cached Jinja2-3.0.3-py3-none-any.whl.metadata (3.5 kB)
Requirement already satisfied: MarkupSafe>=2.0 in d:\anaconda\lib\site-packages (from jinja2==3.0.3->pygpcca>=1.0.4->cellrank) (2.1.1)
Requirement already satisfied: legacy-api-wrap>=1.4 in d:\anaconda\lib\site-packages (from scanpy>=1.7.2->cellrank) (1.4)
Requirement already satisfied: patsy in d:\anaconda\lib\site-packages (from scanpy>=1.7.2->cellrank) (0.5.3)
Requirement already satisfied: pynndescent>=0.5 in d:\anaconda\lib\site-packages (from scanpy>=1.7.2->cellrank) (0.5.11)
Requirement already satisfied: session-info in d:\anaconda\lib\site-packages (from scanpy>=1.7.2->cellrank) (1.0.0)
Requirement already satisfied: statsmodels>=0.13 in d:\anaconda\lib\site-packages (from scanpy>=1.7.2->cellrank) (0.14.0)
Requirement already satisfied: tqdm in d:\anaconda\lib\site-packages (from scanpy>=1.7.2->cellrank) (4.65.0)
Requirement already satisfied: umap-learn!=0.5.0,>=0.5 in d:\anaconda\lib\site-packages (from scanpy>=1.7.2->cellrank) (0.5.5)
Requirement already satisfied: threadpoolctl>=2.0.0 in d:\anaconda\lib\site-packages (from scikit-learn>=0.24.0->cellrank) (3.5.0)
Collecting loompy>=2.0.12 (from scvelo>=0.2.5->cellrank)
  Using cached loompy-3.0.7.tar.gz (4.8 MB)
  Preparing metadata (setup.py): started
  Preparing metadata (setup.py): finished with status 'done'
ERROR: No .egg-info directory found in

Versions:

...Not applicable

FessenSimon avatar Jun 08 '24 09:06 FessenSimon