gggenomes
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Test piping through non-R parsers (/exex/{gb2gff,seq-len}) on non-linux systems
read_seqs(".fna/.gbk/.gff")
and read_gbk()
use non-R parsers to preprocess the data before reading them into R. This is just done by turning the file argument provided to the read_*
function ("foo.fna") into a connection ala pipe("/path/to/seq-len foo.fna")
. This should work on linux systems, but probably not on Windows, and I'm not sure about MacOS...