Peter Amstutz

On the topic of fragment identifiers, here's how it is defined in the schema salad spec: https://www.commonwl.org/v1.0/SchemaSalad.html#Identifier_resolution

encoding considerations: CWL documents should be UTF-8 security considerations: as executable scripts, agents shouldn't automatically run strange CWL files from the internet.

In the CWL sense, outputs are objects (Files and Directories) that will be passed to a downstream step or as final output. In cwltool specifically, the default behavior (without call...

@whlavina Yes, so that requires improving the workflow runner so that it can identify when files are no longer needed. However I think that's an implementation feature rather than something...

Evaluation sequence: 1. User provide inputs 2. Static defaults 3. Dynamic defaults 4. ResourceRequirements 5. InitialWorkDir, EnvVarRequirement, valueFrom Cannot reference dynamic default values from other dynamic default values.

Here's my take on customized delimiters (arbitrary delimiters isn't necessary, just the prefix) https://github.com/common-workflow-language/cwltool/pull/1132

For the above example, one can use `$import` to include the Dockerfile as external text. However, if the Dockerfile needs to import files into the container (using "ADD") then a...

@mr-c this definitely won't work, this will give you the string literal `"$import: alea-Dockerfile"` ``` dockerFile: > $import: alea-Dockerfile ``` But I made a mistake, you want is `$include`: ```...

hi @tonyyzy I agree that organizing outputs is a weak spot. The script you link to is probably the best way to do it in CWL v1.0 and v1.1. However,...

So, having the trap tiles from northwest castle possible get shuffled into Coneria castle was intended (to troll players). However, this doesn't look like a trap tile, it looks like...