Terry Jones

Use a port for communication

7

This is a branch from #14, so that should be merged first and then I can merge master into this branch to clean up the diff. All communications are done...

[check-setup] UnicodeEncodeErrors on terminals with non-Unicode locales

5

There is a non-ASCII unicode ellipsis ('\u2026') on line 61 of nextstrain/cli/command/check_setup.py: ```sh $ nextstrain check-setup (auspice) nextstrain-cli is up to date! Traceback (most recent call last): File "/home/terry/miniconda3/envs/auspice/bin/nextstrain", line...

"failure of some kind" error message could be more helpful

5

Hi. I just tried installing this package - and thanks for writing / releasing / maintaining it! I get errors when I visit a Python file: ``` mypy:Checker indicated failure...

Several attempts at installation fail

4

I just tried to follow the installation instructions at https://usher-wiki.readthedocs.io/en/latest/QuickStart.html I tried three things, none of which worked. 1. Following the Quick install commands, `conda install usher` fails: ```sh $...