Tyler Benster

how to store non-TwoPhotonSeries ophys?

5

I'm not certain how to store light-sheet / light field / DIFF microscopy or even widefield, etc data in NWB. `TwoPhotonSeries` is perfectly reasonable, and uses an `imaging_plane`. `ImageSeries` does...

This matters as Layer cannot be used with row or column, so must use facet: ```julia # This works dataset("cars.json") |> @vlplot( facet={row={field="Origin", type="nominal"}}, spec={ :bar, x={"Horsepower:q", bin={maxbins=15}}, y="count()" }...

How widely is column-major supported?

12

We’ve been having a [discussion over at `Zarr.jl`](https://github.com/meggart/Zarr.jl/issues/78) as to whether the package should default to writing `order=“F”` aka column-major data instead of `order=“C”` aka row-major. We have the impression...

DataFrames & Zarr

1

Hi, I recently learned about Zarr and very interested in it as seems to solve some issues I have with HDF5. Increasingly, DataFrames, as popularized by R and now widely...

Exceeded configured max-open-requests value

2

Thanks for this! Just tried using the docker command in README. I verified that I can see Cromwell Swagger on localhost:8080, but when trying to connect using cromwell-client I get:...

License / package for Nixpkgs?

3

Would you consider adding a free-software license to this repo? Also, any interest in adding this package to nixpkgs? Thanks so much for making this code available!

The following displays a broken image: ``` using TestImages, Unitful, ImageAxes AxisArray(testimage("mandrill"), (:y,:x), (1u"mm", 1u"mm")) ```