TanZhengTang
TanZhengTang
> CPU：intel Core 八代i7 > MX250+GPH 655 > 已经安装好了！感谢您的付出，准备洗白和解锁CFG > 不过有一个问题，就是HiDPi开启之后按照您设置的 > 1600x1066 1343x895 2160x1440 > 选择1343x895也会出现睡眠唤醒后屏幕只显示3/4的问题，而1080x720又感觉太大了，请问有没有什么解决方法或者重新设定分辨率呢？ 我也是一样的机型，cpu i5，但是网卡失效（10.15.17版本），你的有这个问题吗？
> Hi Tangzheng, > > At the moment, the bed file input for amplified_intervals.py requires the following format: > `chr start stop arbitrary_field estimated_CN` > Which is the output format...
> > Hi Tangzheng, > > At the moment, the bed file input for amplified_intervals.py requires the following format: > > `chr start stop arbitrary_field estimated_CN` > > Which is...
> Hello @groveswallow, > Does the BAM file to have chromosome names in the format "1", "2", "3", .... or "chr1", "chr2", ..? If it is the first case, then...
> It seems like an issue with "chr" is removed from the chromosome names by ReadDepth. > You have 2 options - change the alts.dat file to add include "chr"...
> It seems like an issue with "chr" is removed from the chromosome names by ReadDepth. > You have 2 options - change the alts.dat file to add include "chr"...
> Are you using the latest commit from AA? If not can you do a git pull and try again? Ok,I get it. Thanks!
> Are you using the latest commit from AA? If not can you do a git pull and try again? Sorry to bother you again,the running process after using the...
> The warnings are expected. Is the output stuck at this place? Yes,the output stuck here for some time,eventually I got those files: gbm39-ec_amplicon1_cycles.txt gbm39-ec_chr7_45884632_45895168_cnseg.txt gbm39-ec.chr7:87260878-87640883.out gbm39-ec_amplicon1_edges_cnseg.txt gbm39-ec_chr7_54729879_56219660_cnseg.txt gbm39-ec_chr8_127991498_130336500_cnseg.txt gbm39-ec_amplicon1_edges.txt...
emmm,the reason of process about shut down seems to be the license of mosek.The log file has uploaded. [gbm39-ec.log](https://github.com/virajbdeshpande/AmpliconArchitect/files/5434019/gbm39-ec.log) and the tail of nohup.txt: [root:INFO] #TIME 14725.387 Selecting neighbors [root:INFO]...