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Error in python module

Open guttula91 opened this issue 2 years ago • 2 comments

results <- CytoTalk::run_cytotalk(lst_scrna, type_a, type_b) [1 / 8] (22:58:38) Preprocessing... [2 / 8] (23:00:42) Mutual information matrix... [3 / 8] (23:11:37) Indirect edge-filtered network... [4 / 8] (23:12:01) Integrate network... [5 / 8] (23:13:12) PCSF... Error in py_module_import(module, convert = convert) : ModuleNotFoundError: No module named 'pcst_fast'

guttula91 avatar Aug 03 '22 03:08 guttula91

Please see the "feature_RcallPy" branch for correctly installing the 'pcst_fast' python module, which can be called when you run an R script. https://github.com/tanlabcode/CytoTalk/tree/feature_RcallPy

huBioinfo avatar Aug 19 '22 09:08 huBioinfo

Thanks for the prompt response, It generated some files in each output folder it will be great if there is any proper documentation for analyzing the results iam attaching the screenshot of the result folder

On Fri, Aug 19, 2022 at 5:36 AM huBioinfo @.***> wrote:

Please see the "feature_RcallPy" branch for correctly installing the 'pcst_fast' python module, which can be called when you run an R script. https://github.com/tanlabcode/CytoTalk/tree/feature_RcallPy

— Reply to this email directly, view it on GitHub https://github.com/tanlabcode/CytoTalk/issues/10#issuecomment-1220466166, or unsubscribe https://github.com/notifications/unsubscribe-auth/AIFVI2MR2EI6BRMORSCKKVDVZ5ISHANCNFSM55NIIENQ . You are receiving this because you authored the thread.Message ID: @.***>

guttula91 avatar Aug 19 '22 17:08 guttula91