CytoTalk
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Error in python module
results <- CytoTalk::run_cytotalk(lst_scrna, type_a, type_b) [1 / 8] (22:58:38) Preprocessing... [2 / 8] (23:00:42) Mutual information matrix... [3 / 8] (23:11:37) Indirect edge-filtered network... [4 / 8] (23:12:01) Integrate network... [5 / 8] (23:13:12) PCSF... Error in py_module_import(module, convert = convert) : ModuleNotFoundError: No module named 'pcst_fast'
Please see the "feature_RcallPy" branch for correctly installing the 'pcst_fast' python module, which can be called when you run an R script. https://github.com/tanlabcode/CytoTalk/tree/feature_RcallPy
Thanks for the prompt response, It generated some files in each output folder it will be great if there is any proper documentation for analyzing the results iam attaching the screenshot of the result folder
On Fri, Aug 19, 2022 at 5:36 AM huBioinfo @.***> wrote:
Please see the "feature_RcallPy" branch for correctly installing the 'pcst_fast' python module, which can be called when you run an R script. https://github.com/tanlabcode/CytoTalk/tree/feature_RcallPy
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