error in classify.pl (no data in allele contig table)

[karthickbrlab]

blastn -query dip_cds.fa -db brapa.cds -out dr.blast.out -evalue 0.001 -outfmt 6 -num_threads 4 -num_alignments 5

perl blastn_parse.pl -i dr.blast.out -o Edr.blast.out -q dip_cds.fa -b 1 -c 0.6 -d 0.8

perl classify.pl -i Edr.blast.out -p 2 -r brapa.gff -g dip.gff

Use of uninitialized value $tgene in substitution (s///) at classify.pl line 54, <IN> line 259260. Use of uninitialized value $tgene in hash element at classify.pl line 55, <IN> line 259260.

[13061994]

Can you get this error solution?

[karthickbrlab]

Unfortunately, no.

On Wed, 20 Dec, 2023, 9:47 am 13061994, @.***> wrote:

Can you get this error solution?

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