treesub icon indicating copy to clipboard operation
treesub copied to clipboard

gaps as novel stop codons

Open thierryjanssens opened this issue 5 years ago • 0 comments

Hi,

when running treesub on incomplete sequences (i.e. alignment with gaps) stop codons emerge (e.g. I96*) in the output. This happens for entire stretches of sequences. Is there a way to circumvent this?

Regards,

Thierry

thierryjanssens avatar Mar 26 '19 11:03 thierryjanssens