taigw

@satrajitgithub @MENG1996 Not sure what problem you have. I have updated the code and a demo for single-modality segmentation is added. See `examples/demo_densecrf3d.py` for details.

@sara-eb I have now added a demo for multi-class segmentation, see examples/demo_densecrf.py To understand the meaning of each parameter, please check the original paper: Philipp Krähenbühl and Vladlen Koltun, "Efficient...

@JunMa11 Yes, your comments are correct.

Please go to PyMIC_example (https://github.com/HiLab-git/PyMIC_examples) to find some examples to use PyMIC. If you have run some segmentation examples, you should know how to put your data. Actually, you can...

Hi @zhang-qiang-github , please make sure you have read the demo for 3D images. https://github.com/taigw/GeodisTK/blob/master/demo3d.py If you can run that demo, please use similar hyper-parameters as that demo in your...

@zhang-qiang-github , Thanks for your suggestion. I think in a single forward pass, the value of each pixel depends on its left, up and left up neighbors, which makes it...

Hi, the link for the preprocessed data will be provided later. You can drop me an email for the access to the data at the current stage. @zhangjingcode

The download link has been provided in the readme file. Not sure what do you mean by saying "uncertain slices", do you mean each image has labels provided by two...

Hello, the problem has been fixed, and you can try the latest version of PyMIC by installing PyMIC from the dev branch (download the source code and use `python setup.py...

@apopli You can do this by setting that value as True in the configure file.