Tooba Abbassi-Daloii comments

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                                            Tooba Abbassi-Daloii

Develop a potential recipe on conversion of secondary IDs to primary IDs

@proccaserra, It will take some time to wrap up this recipe, but I am working on it.

Gene mapping database issues

Yes, it is. I am using the scripts here to update the databases. Though some minor changes are required. A new README.md file will be added with some more details.

Gene mapping database issues

No, thank you! :). I meant an updated README ;) Nice, indeed. I will push the minor changes by tomorrow so the repo would be up-to-date.

Issues filtering for datasource (in Webservice, in R) and in Cytoscape?

> BridgeDb back to 104 The PR is sent

Issues filtering for datasource (in Webservice, in R) and in Cytoscape?

regarding using an older version of BridgeDb (point 3): I have checked the dependencies for creating gene/protein derby files, and I noticed I have not updated that. It is even...

Issues filtering for datasource (in Webservice, in R) and in Cytoscape?

@DeniseSl22, I tried to reproduce v104 file again (as it was correct), but the new derby file has the same issue (cannot be searched with gene symbols in PV 3)....

Issues filtering for datasource (in Webservice, in R) and in Cytoscape?

> This is getting stranger and stranger.... *sighs.... Could you share the new 104 version with me that you just created? Than I can double check if I see the...

Issues filtering for datasource (in Webservice, in R) and in Cytoscape?

The issue of not being able to search the database in PV using gene names was because of a minor change we made a while ago to fix an error....