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Unknown behaviour read > max read length

Open t-neumann opened this issue 7 years ago • 2 comments

Currently only tcperreadpos crashes if a read is found > than a manually set max read length. Add some checks if such behaviour is observed and throw warnings or even abort.

t-neumann avatar Mar 29 '17 14:03 t-neumann

Just wanted to add. I tried running count without giving the max read length, but it doesn't generate any files or errors. I had to set it manually. It seems the estimate function is not working with me.

AMA-cs avatar Jun 24 '20 17:06 AMA-cs

Yeah currently the estimation is not properly working when you feed in trimmed reads so we recommend to set it manually.

t-neumann avatar Jun 25 '20 07:06 t-neumann