Jason Swails

Results 75 comments of Jason Swails

I suspect that b makes the most sense, although a might be the easiest to implement. The typical workflow of installation is something along the lines of ``` sh ./configure...

The more you add to `ambermini` the more of a time sink it becomes to maintain (by the way, AmberTools 16 was released on April 30th). If reduce is already...

> Great! What needs to be done to update ambermini to keep it in sync? Not sure. There was a _massive_ reorganization of force fields that happened after I started...

I used `meld` for this. If you meld two directories, it shows you which files differ between them and lets you look at the diffs file-by-file. Then you can merge...

Patches for these programs are very rare in my experience, and often only address a tiny corner case. You can do the same thing each time if you maintain an...

This looks like a problem on a Mac. You can add the -static flag to the linker commands (assuming there is a static lib for all of the needed libraries)....

Nevermind on the clang integration. We need to build Fortran codes which requires gcc.

I tend to agree with @kyleabeauchamp. I don't think the conda gcc has anything to offer over the one you get with a package manager. And I have yet to...

It'll be easier if I can see what you mean by > hacking the recipe to specify all sorts of local paths that get erased by the conda build environment...

> @swails: Fortran? How's that any different from C++? If you fire up a vanilla Linux distro (true for Fedora, Ubuntu, and OpenSUSE), you get no gfortran and no g++...