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Published 20 hours ago • verified publisher icon stephenfloor
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For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and CDS).

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multiple sequence extracted for one gene

Hi there, I am using the scripts provided to extract some regulatory sequence of genes using genome file, while I received multiple sequences for one gene, and not sure why...

alexwu66666 avatar alexwu66666

[Suggestion] Option for index/offset and full mRNA transcripts

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I love the scripts but had to tweak them a bit because of issue with GTF and genome index. I had to calculate the difference between the sequences I had...

vizkidd avatar vizkidd

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verified publisher icon stephenfloor

Metadata

For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and CDS).

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