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core dumped phytime on my dataset

Open Jigyasa3 opened this issue 4 years ago • 0 comments

Hey all!

I am using the default settings of phytime on my dataset. My dataset is in the same format as the example dataset, but phytime is not running at all.

code- phytime --xml=cog0525_dating.xml

error- malloc(): corrupted top size Aborted (core dumped)

I am running the command on a computing cluster using 150G memory on a single AMD node.

The file "cog0525_dating.xml" and the nexus file "protein_nucleotide_cockroach-extracted-Treponema-COG0525.txt" are available here-

Jigyasa3 avatar Oct 06 '20 01:10 Jigyasa3