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Segmentation fault

Open alissawilliams opened this issue 5 years ago • 0 comments

Hello-

I have been trying to run phyml on a nucleotide alignment and an amino acid alignment and in both cases, I keep getting segmentation faults. These errors occur whether I try to run the job on haswell or high memory nodes. The error message looks like this:

/var/spool/slurmd/job2539624/slurm_script: line 15: 171358 Segmentation fault
(core dumped) phyml -i /projects/$USER/jmodeltest-2.1.10/aligned_clpP2_seqs_v 4_withoutCyperids_gblocksn1.fas.phy -d nt -n 1 -b 1000 --run_id TPM1uf+I+G -m 01 2210 -f m -v e -c 4 -a e --no_memory_check -o tlr -s BEST --n_rand_starts 100

Any help would be appreciated! Thanks!

alissawilliams avatar Jun 17 '19 23:06 alissawilliams