Stephane Guindon
Stephane Guindon
Can you please try with 3.3.20200621, i.e., the latest release? Thanks.
It probably has to do with weird carriage return character or something similar. Would you mind sending me the sequence file?
There seems to be a problem with the noIndel alignment around line 216.
Please let me know which version of PhyML you are using here and what the command-line options are as well.
Would you mind sharing more information on the computer and OS on which you tried to compile, along with the output of the ./configure and make commands? That would help...
The code for PhyTime is no longer up-to-date I'm afraid. It is best to leave it out of the package right now. I've amended configure.ac in b0c75ad93c10e3e3a7c9a956dbca1cb3deb656a9 so that compilation...
Dear Petra, Have you tried installing PhyML through its Bioconda package? That might be the easiest way to get a recent version of PhyML run on Windows. Regards,
Can you tell me how you launch PhyML here?
It doesn't look like an error message generated by PhyML. Any chance you could post the standard output along with the command-line?
Would you mind updating the version of PhyML you're running and trying again?