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Java OutOfBoundsException on some genomes

Open BrigidaGallone opened this issue 1 year ago • 1 comments

Hello,

I am using the latest version of the pipeline (v.1.0.3) and I am testing a large group of genomes from ncbi (very variable in quality) using the profile module both with PROT and BUSCO. For some genomes I got a java exception as follow: Screenshot 2023-02-24 at 11 45 09

In this case, the genome GCA_017580835.1 had no errors with PRO profiling but the BUSCO profiling did not work. A few genomes failed (with the same error) with the PRO profiling: GCA_900068945.1 GCA_900068915.1 GCA_900069095.1 GCA_900068965.1 GCA_900068985.1 GCA_018221805.1 GCA_900068975.1 GCA_900068955.1

What does the error mean and do you have any idea about what is causing it?

Thanks a lot for your help and the amazing pipeline!

Best, Brigida

BrigidaGallone avatar Feb 24 '23 10:02 BrigidaGallone