foldseek
foldseek copied to clipboard
Easy search: how do I output both sequence similarity and structure-sequence/3Di similarity?
When you run easy search and output the pident/fident columns, is this sequence similarity (what you would get from mmseqs2/blast) or structure-sequence similarity (using the 3Di)?
Also, how can I output both sequence and structure-sequence similarity?
Thank you!!
Danny
It is the amino acid similarity. Currently, we do not support to print out both.