Profiling eukaryote contigs?

[timghaly]

This looks like a great tool.

I'm wondering though how well metabuli would perform classifying environmental mciroeukaryotes. Particularly, because it looks like that Prodigal is used to generate the databases, which is not ideal for euk gene predictions. Would metabuli outperform MMSeqs2 Taxonomy with nr database for assigning euk taxonomy to contigs? If so, what metabuli database would be best suited?

Thanks!