Stefano Nardone

icon company boehringer-ingelheim icon location Ingelheim--Germany

Results 3 comments of Stefano Nardone

not-yet-implemented 'Matrix' subsetting

I am getting the same error

Error in .subscript.2ary(x, , j, drop = drop) : subscript out of bounds when trying to merge 4 different SCTransform Seurat objects

It happens the same when you run AggregateExpression and I can confirm now also with AverageExpression. jj

Error in .subscript.2ary(x, , j, drop = drop) : subscript out of bounds when trying to merge 4 different SCTransform Seurat objects

I switched to Scanpy and I suggest you guys to do the same. working with big data in anndata format is far better and faster.