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[BUG] DataFrames Failing to Load

Open TheCedarPrince opened this issue 2 years ago • 0 comments

DataFrames seems to not be working on my RHEL 8 machine running Julia 1.7.3:

library(JuliaConnectoR)

pkg <- juliaImport("Pkg")
pkg$activate("TUTORIAL", shared = TRUE) 
pkg$add("DataFrames")
juliaImport("DataFrames")

Which results in this failure:

WARNING: could not import DataAPI.metadata into DataFrames
WARNING: could not import DataAPI.metadatakeys into DataFrames
WARNING: could not import DataAPI.metadata! into DataFrames
WARNING: could not import DataAPI.deletemetadata! into DataFrames
WARNING: could not import DataAPI.emptymetadata! into DataFrames
WARNING: could not import DataAPI.colmetadata into DataFrames
WARNING: could not import DataAPI.colmetadatakeys into DataFrames
WARNING: could not import DataAPI.colmetadata! into DataFrames
WARNING: could not import DataAPI.deletecolmetadata! into DataFrames
WARNING: could not import DataAPI.emptycolmetadata! into DataFrames
ERROR: LoadError: UndefVarError: metadatasupport not defined
Stacktrace:
  [1] getproperty(x::Module, f::Symbol)
    @ Base ./Base.jl:35
  [2] top-level scope
    @ ~/.julia/packages/DataFrames/Lrd7K/src/other/metadata.jl:8
  [3] include(mod::Module, _path::String)
    @ Base ./Base.jl:418
  [4] include(x::String)
    @ DataFrames ~/.julia/packages/DataFrames/Lrd7K/src/DataFrames.jl:1
  [5] top-level scope
    @ ~/.julia/packages/DataFrames/Lrd7K/src/DataFrames.jl:172
  [6] include
    @ ./Base.jl:418 [inlined]
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{St
ring}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{
Pair{Base.PkgId, UInt64}}, source::String)
    @ Base ./loading.jl:1318
  [8] top-level scope
    @ none:1
  [9] eval
    @ ./boot.jl:373 [inlined]
 [10] eval(x::Expr)
    @ Base.MainInclude ./client.jl:453
 [11] top-level scope
    @ none:1
in expression starting at /home/[REDACTED]/.julia/packages/DataFrames/Lrd7K/
src/other/metadata.jl:8
in expression starting at /home/[REDACTED]/.julia/packages/DataFrames/Lrd7K/
src/DataFrames.jl:1
Error: Evaluation in Julia failed.
Original Julia error message:
LoadError: Failed to precompile DataFrames [a93c6f00-e57d-5684-b7b6-d8193f3e46c0] to /
home/[REDACTED]/.julia/compiled/v1.7/DataFrames/jl_9mFYjo.
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:33
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout
::IO, ignore_loaded_modules::Bool)
    @ Base ./loading.jl:1466
  [3] compilecache(pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1410
  [4] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1120
  [5] require(uuidkey::Base.PkgId)
    @ Base ./loading.jl:1013
  [6] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:997
  [7] eval
    @ ./boot.jl:373 [inlined]
  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::S
tring)
    @ Base ./loading.jl:1196
  [9] include_string (repeats 2 times)
    @ ./loading.jl:1206 [inlined]
 [10] mainevalcmd(str::String)
    @ Main.RConnector ~/.rlibr

This does not happen on my Fedora 34 machine running Julia 1.8. Any idea as to what is happening?

Either way, really love this package @stefan-m-lenz -- thanks for the great work here!

TheCedarPrince avatar Oct 23 '22 20:10 TheCedarPrince