Jan Stanstrup

This is great! Is there any way the final prompt? The preview seems to show the placeholder unless I am doing something wrong.

it would just give some peace of mind that it is doing what you think it is doing. Write the queries and response to a log file?

No I would not use HMDB data. That was just for the example. I would probably like to create an empty DB that I can keep adding to as I...

Sure. But an R file is not such a proper database to me and not safe for multiple users in the same way. Ideally the curating tool could be used...

Sorry about that. Happy it is useful. It should be `"pos"` and not `"positive"`. There is no safety check for that. The order in your workflow is correct. But you...

Thanks! I should indeed add that to the help page. I think you can also pass a numeric matrix.

Yes skype would be good. When would suit you? I am quite open this week. If we are start maybe we can find a way to organize this such that...

If you ware coming here because this fails in your dockerfile you need: ```yaml ARG CFLAGS="-Wno-incompatible-pointer-types" RUN pecl install phalcon ```

I believe Johannes is correct. You can try to use matchedFilter instead. That is often very good at integrating sub-optimal data (at the cost of picking more noise).

This happens when you do not create the faahko object using `readMsExperiment` as shown in the tutorial. Then the faahko object from the faahKO package is used instead. This object...