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Fix issue 3146 for multiply_log

Open SteveBronder opened this issue 10 months ago • 9 comments

Summary

Fixes #3146 by making the deduction for branch logic be compile time using if constexpr. This also cleans up a lot of the code for offset_multiply_constrain. Instead of having all combinations of signatures for vector inputs we just use a little if constexpr to deduce which inputs need iterated over.

Tests

There is 1 new test in rev for testing issue #3146 specifically. You can run all tests associated with this PR via

python ./runTests.py -j4 ./test/unit/math/ -f multiply_log
python ./runTests.py -j4 ./test/unit/math/ -f offset_mult

Side Effects

Nope

Release notes

Fix issue so that rep_matrix can be used inside of offset_multiplier constraints.

Checklist

  • [x] Copyright holder: Simons Foundation

    The copyright holder is typically you or your assignee, such as a university or company. By submitting this pull request, the copyright holder is agreeing to the license the submitted work under the following licenses: - Code: BSD 3-clause (https://opensource.org/licenses/BSD-3-Clause) - Documentation: CC-BY 4.0 (https://creativecommons.org/licenses/by/4.0/)

  • [x] the basic tests are passing

    • unit tests pass (to run, use: ./runTests.py test/unit)
    • header checks pass, (make test-headers)
    • dependencies checks pass, (make test-math-dependencies)
    • docs build, (make doxygen)
    • code passes the built in C++ standards checks (make cpplint)
  • [x] the code is written in idiomatic C++ and changes are documented in the doxygen

  • [x] the new changes are tested

SteveBronder avatar Feb 13 '25 18:02 SteveBronder

Does this affect https://github.com/stan-dev/stan/issues/3330 or is it unrelated?

WardBrian avatar Feb 13 '25 19:02 WardBrian

This is just #3146 I'm writing a separate PR for https://github.com/stan-dev/stan/issues/3330

SteveBronder avatar Feb 13 '25 20:02 SteveBronder


Name Old Result New Result Ratio Performance change( 1 - new / old )
arma/arma.stan 0.35 0.31 1.13 11.37% faster
low_dim_corr_gauss/low_dim_corr_gauss.stan 0.01 0.01 1.13 11.38% faster
gp_regr/gen_gp_data.stan 0.03 0.03 1.18 15.01% faster
gp_regr/gp_regr.stan 0.14 0.09 1.57 36.37% faster
sir/sir.stan 72.85 70.71 1.03 2.94% faster
irt_2pl/irt_2pl.stan 4.57 4.28 1.07 6.41% faster
eight_schools/eight_schools.stan 0.06 0.06 1.01 0.58% faster
pkpd/sim_one_comp_mm_elim_abs.stan 0.27 0.25 1.07 6.38% faster
pkpd/one_comp_mm_elim_abs.stan 20.26 19.41 1.04 4.22% faster
garch/garch.stan 0.46 0.4 1.14 12.31% faster
low_dim_gauss_mix/low_dim_gauss_mix.stan 2.82 2.59 1.09 8.16% faster
arK/arK.stan 1.87 1.7 1.1 8.96% faster
gp_pois_regr/gp_pois_regr.stan 2.86 2.72 1.05 4.9% faster
low_dim_gauss_mix_collapse/low_dim_gauss_mix_collapse.stan 8.78 8.41 1.04 4.23% faster
performance.compilation 187.66 186.95 1.0 0.38% faster
Mean result: 1.1099135107132903

Jenkins Console Log Blue Ocean Commit hash: 1c418093dfd3248c686e713b8a190cf69f7c63ba


Machine information No LSB modules are available. Distributor ID: Ubuntu Description: Ubuntu 20.04.3 LTS Release: 20.04 Codename: focal

CPU: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian Address sizes: 46 bits physical, 48 bits virtual CPU(s): 80 On-line CPU(s) list: 0-79 Thread(s) per core: 2 Core(s) per socket: 20 Socket(s): 2 NUMA node(s): 2 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz Stepping: 4 CPU MHz: 2400.000 CPU max MHz: 3700.0000 CPU min MHz: 1000.0000 BogoMIPS: 4800.00 Virtualization: VT-x L1d cache: 1.3 MiB L1i cache: 1.3 MiB L2 cache: 40 MiB L3 cache: 55 MiB NUMA node0 CPU(s): 0,2,4,6,8,10,12,14,16,18,20,22,24,26,28,30,32,34,36,38,40,42,44,46,48,50,52,54,56,58,60,62,64,66,68,70,72,74,76,78 NUMA node1 CPU(s): 1,3,5,7,9,11,13,15,17,19,21,23,25,27,29,31,33,35,37,39,41,43,45,47,49,51,53,55,57,59,61,63,65,67,69,71,73,75,77,79 Vulnerability Gather data sampling: Mitigation; Microcode Vulnerability Itlb multihit: KVM: Mitigation: VMX disabled Vulnerability L1tf: Mitigation; PTE Inversion; VMX conditional cache flushes, SMT vulnerable Vulnerability Mds: Mitigation; Clear CPU buffers; SMT vulnerable Vulnerability Meltdown: Mitigation; PTI Vulnerability Mmio stale data: Mitigation; Clear CPU buffers; SMT vulnerable Vulnerability Reg file data sampling: Not affected Vulnerability Retbleed: Mitigation; IBRS Vulnerability Spec rstack overflow: Not affected Vulnerability Spec store bypass: Mitigation; Speculative Store Bypass disabled via prctl Vulnerability Spectre v1: Mitigation; usercopy/swapgs barriers and __user pointer sanitization Vulnerability Spectre v2: Mitigation; IBRS; IBPB conditional; STIBP conditional; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected Vulnerability Srbds: Not affected Vulnerability Tsx async abort: Mitigation; Clear CPU buffers; SMT vulnerable Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault epb cat_l3 cdp_l3 invpcid_single pti intel_ppin ssbd mba ibrs ibpb stibp tpr_shadow vnmi flexpriority ept vpid ept_ad fsgsbase tsc_adjust bmi1 hle avx2 smep bmi2 erms invpcid rtm cqm mpx rdt_a avx512f avx512dq rdseed adx smap clflushopt clwb intel_pt avx512cd avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local dtherm ida arat pln pts hwp hwp_act_window hwp_epp hwp_pkg_req pku ospke md_clear flush_l1d arch_capabilities

G++: g++ (Ubuntu 9.4.0-1ubuntu1~20.04) 9.4.0 Copyright (C) 2019 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

Clang: clang version 10.0.0-4ubuntu1 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin

stan-buildbot avatar Feb 14 '25 03:02 stan-buildbot


Name Old Result New Result Ratio Performance change( 1 - new / old )
arma/arma.stan 0.33 0.33 1.02 1.69% faster
low_dim_corr_gauss/low_dim_corr_gauss.stan 0.01 0.01 1.02 2.24% faster
gp_regr/gen_gp_data.stan 0.03 0.03 1.02 2.08% faster
gp_regr/gp_regr.stan 0.1 0.1 1.0 -0.46% slower
sir/sir.stan 70.42 68.46 1.03 2.79% faster
irt_2pl/irt_2pl.stan 4.2 3.99 1.05 4.95% faster
eight_schools/eight_schools.stan 0.06 0.06 1.03 2.73% faster
pkpd/sim_one_comp_mm_elim_abs.stan 0.25 0.24 1.06 5.49% faster
pkpd/one_comp_mm_elim_abs.stan 19.43 18.55 1.05 4.55% faster
garch/garch.stan 0.43 0.41 1.05 5.18% faster
low_dim_gauss_mix/low_dim_gauss_mix.stan 2.72 2.62 1.04 3.51% faster
arK/arK.stan 1.8 1.73 1.04 3.6% faster
gp_pois_regr/gp_pois_regr.stan 2.98 2.74 1.09 7.95% faster
low_dim_gauss_mix_collapse/low_dim_gauss_mix_collapse.stan 8.81 8.41 1.05 4.5% faster
performance.compilation 181.9 187.37 0.97 -3.01% slower
Mean result: 1.0335952550885807

Jenkins Console Log Blue Ocean Commit hash: 1e79dd5a82df2796732f643eb10420d634ec4200


Machine information No LSB modules are available. Distributor ID: Ubuntu Description: Ubuntu 20.04.3 LTS Release: 20.04 Codename: focal

CPU: Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian Address sizes: 46 bits physical, 48 bits virtual CPU(s): 80 On-line CPU(s) list: 0-79 Thread(s) per core: 2 Core(s) per socket: 20 Socket(s): 2 NUMA node(s): 2 Vendor ID: GenuineIntel CPU family: 6 Model: 85 Model name: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz Stepping: 4 CPU MHz: 2400.000 CPU max MHz: 3700.0000 CPU min MHz: 1000.0000 BogoMIPS: 4800.00 Virtualization: VT-x L1d cache: 1.3 MiB L1i cache: 1.3 MiB L2 cache: 40 MiB L3 cache: 55 MiB NUMA node0 CPU(s): 0,2,4,6,8,10,12,14,16,18,20,22,24,26,28,30,32,34,36,38,40,42,44,46,48,50,52,54,56,58,60,62,64,66,68,70,72,74,76,78 NUMA node1 CPU(s): 1,3,5,7,9,11,13,15,17,19,21,23,25,27,29,31,33,35,37,39,41,43,45,47,49,51,53,55,57,59,61,63,65,67,69,71,73,75,77,79 Vulnerability Gather data sampling: Mitigation; Microcode Vulnerability Itlb multihit: KVM: Mitigation: VMX disabled Vulnerability L1tf: Mitigation; PTE Inversion; VMX conditional cache flushes, SMT vulnerable Vulnerability Mds: Mitigation; Clear CPU buffers; SMT vulnerable Vulnerability Meltdown: Mitigation; PTI Vulnerability Mmio stale data: Mitigation; Clear CPU buffers; SMT vulnerable Vulnerability Reg file data sampling: Not affected Vulnerability Retbleed: Mitigation; IBRS Vulnerability Spec rstack overflow: Not affected Vulnerability Spec store bypass: Mitigation; Speculative Store Bypass disabled via prctl Vulnerability Spectre v1: Mitigation; usercopy/swapgs barriers and __user pointer sanitization Vulnerability Spectre v2: Mitigation; IBRS; IBPB conditional; STIBP conditional; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected Vulnerability Srbds: Not affected Vulnerability Tsx async abort: Mitigation; Clear CPU buffers; SMT vulnerable Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault epb cat_l3 cdp_l3 invpcid_single pti intel_ppin ssbd mba ibrs ibpb stibp tpr_shadow vnmi flexpriority ept vpid ept_ad fsgsbase tsc_adjust bmi1 hle avx2 smep bmi2 erms invpcid rtm cqm mpx rdt_a avx512f avx512dq rdseed adx smap clflushopt clwb intel_pt avx512cd avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local dtherm ida arat pln pts hwp hwp_act_window hwp_epp hwp_pkg_req pku ospke md_clear flush_l1d arch_capabilities

G++: g++ (Ubuntu 9.4.0-1ubuntu1~20.04) 9.4.0 Copyright (C) 2019 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

Clang: clang version 10.0.0-4ubuntu1 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/bin

stan-buildbot avatar Feb 19 '25 04:02 stan-buildbot

@nhuurre or @andrjohns would either of you mind taking a look at this? @nhuurre Brian pointed out you handled #3033 which is very similar

SteveBronder avatar Feb 21 '25 16:02 SteveBronder

Can these scalar/matrix/etc overloads all be condensed? They all follow a similar pattern/logic (afaict).

We have as_array_or_scalar() as well as the vectorised select(), so the functions can be scalar/container agnostic (examples of their usage in bernoulli_cdf)

andrjohns avatar Mar 02 '25 09:03 andrjohns

Does lmultiply need to also be considered?

jachymb avatar Mar 03 '25 18:03 jachymb

Huh, I didn't realize lmultiply even really existed in the math library. I'm pretty sure the stan compiler still just rewrites it to multiply_log.

They definitely should be consistent between the two

WardBrian avatar Mar 03 '25 19:03 WardBrian

Most of this PR is if-constexpr-template magic that goes way over my head.

This is, luckily, the part that I feel comfortable reviewing, so between the two of us it seems likely we will be able to make it work

WardBrian avatar Mar 07 '25 19:03 WardBrian