For bam files aligned to transcriptome, I am getting the error 'Unknown sequence name'?

[mohamedbahru]

Hi,

I have bam files aligned to the transcriptome. I used the per-base base depth function on those bam files. I am getting the following error.

thread '' panicked at 'Fetched reference sequence: Unknown sequence name: NM_001011874.', src/commands/base_depth.rs:275:30 note: run with RUST_BACKTRACE=1 environment variable to display a backtrace