Sakina Saif

`echo $PYTHONPATH` /home/ubuntu/cDNA_Cupcake/sequence/:/home/ubuntu/cDNA_Cupcake/sequence/:/home/ubuntu/cDNA_Cupcake/sequence/:/home/ubuntu/cDNA_Cupcake/ `echo $PATH` /home/ubuntu/miniconda3/envs/SQANTI3.env/bin:/home/ubuntu/bioinfo/STAR-2.7.0a/bin/Linux_x86_64:/home/ubuntu/bioinfo/cellranger-3.1.0:/home/ubuntu/.local/bin:/home/ubuntu/miniconda3/bin:/home/ubuntu/miniconda3/condabin:/home/ubuntu/cDNA_Cupcake/sequence:/home/ubuntu/cDNA_Cupcake/rarefaction `which collapse_isoforms_by_sam.py` /home/ubuntu/miniconda3/envs/SQANTI3.env/bin/collapse_isoforms_by_sam.py