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Installing error in Bpipe on M1 Mac

2

I am trying to install Bpipe version 0.9.11 from gitihub source code set up on M1 Mac. I am getting this error as configure file is not found in the...

Mercilena

slurm scheduler not working with slurm-wlm-torque qstat

5

I'm trying to run bpipe on a slurm cluster. This cluster does not have qstat installed, so the pipeline never progresses to the next step. I've tried to use qstat...

nemartins

Hello, While debugging the reason for a failing test for Bioconda Mintie (https://github.com/bioconda/bioconda-recipes/pull/48862) I've found out that `bpipe --help` started returning status code 1 in version 0.9.12. ``` martin@tuxedo:/tmp/mintie/LinuxArtifacts/packages/noarch/fff$ bpipe...

martin-g

Null PID reference

2

I believe this is related to #201. I am running Bpipe 0.9.11 in Apptainer. @hh1985 in #201 was using Docker, so possibly this is related to containerization though really I...

kevinkovalchik