crash with multisession BIDS data

[yonestar]

Hi Tamas,

It is wonderful that you made this great tool, AND, that you made it so accessible w/ a docker. I am excited to be applying it to my data.

The docker is crashing for me. The logs are attached. I tried it on two subjects, one with --keep-derivatives and one without. The error messages seem a bit different. Attaching the logs now. Archive.zip

Both subjects are in valid BIDS format.

I have one guess as to a potential problem. I have data from multiple time points (pre- and post-treatment), so my bids structure is subject/ses-XX/anat,func,fmap. Perhaps your code does not expect the session level? Also, my data is all gzipped

Thanks Yoni Ashar Wager lab