Stephen Ficklin
Stephen Ficklin
# Core Tripal 4 Development Task As part of working on issue #1515 we noticed that the Triupal field collection YML file does not indicate if a field is searchable...
# Core Tripal 4 Development Task ## Branch Name: will be different for every extension module As discussed by the PMC, the following modules are slated for inclusion in the...
# Core Tripal 4 Development Task As metioned on PR #1388 the Sequence Residues field is in need of validation so that it won't let someone put data that is...
Currently the ChadoStorage class is mostly functional, but so that we do not forget, these functions still need implemenatation: - [ ] `deleteValues()` - [ ] `findValues()`
This is a list of items that need correcting with our TripalIdSpace and TripalVocabulary plugins. # Tripal Default Implementation - [ ] The table structure for storing terms houses properties,...
I'm finding the version numbers we attach to our Flyway migrations a bit confusing for these reasons: - Flyway migrations have a prefix of `1.3.3` but the current Chado version...
It was proposed in our Tripal/Chado discussion this morning to move the frange, SO and genetic_code tables into the base schema of Chado and no longer have them separate. This...
This issue imported from the [Chado v1.4 requested changes](https://docs.google.com/document/d/1t_Jb4XxUPtgGRSKtznsqvjTjmR4vpFHPQROMQ0OZK9A/edit) google doc: http://gmod.827538.n3.nabble.com/Property-tables-and-units-td4047268.html#a4047297 How to deal with numerical values? Otherwise can’t naively sort or filter values in a query. To solve...
Are the `frange` and other ancillary schemas that come with Chado still needed? We're wondering if for Tripal v4 we need to keep supporting those schemas.
In Tripal we often search for cvtermsynonyms using the `synonym` column and the `type_id` column. We can improve performance if we add an index for both of those columns