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Zarr 3.0 support?

Open doronbehar opened this issue 10 months ago • 2 comments

Currently it fails for me with:

Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "<string>", line 1, in <lambda>
  File "/nix/store/26yi95240650jxp5dj78xzch70i1kzlz-python3-3.12.9/lib/python3.12/importlib/__init__.py", line 90, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "<frozen importlib._bootstrap>", line 1387, in _gcd_import
  File "<frozen importlib._bootstrap>", line 1360, in _find_and_load
  File "<frozen importlib._bootstrap>", line 1331, in _find_and_load_unlocked
  File "<frozen importlib._bootstrap>", line 935, in _load_unlocked
  File "<frozen importlib._bootstrap_external>", line 999, in exec_module
  File "<frozen importlib._bootstrap>", line 488, in _call_with_frames_removed
  File "/nix/store/dfd4m8mcyjn7p26n2y9zznc0khix5wms-python3.12-multiscale-spatial-image-2.0.2/lib/python3.12/site-packages/multiscale_spatial_image/__init__.py", line 15, in <module>
    from .multiscale_spatial_image import MultiscaleSpatialImage
  File "/nix/store/dfd4m8mcyjn7p26n2y9zznc0khix5wms-python3.12-multiscale-spatial-image-2.0.2/lib/python3.12/site-packages/multiscale_spatial_image/multiscale_spatial_image.py", line 7, in <module>
    from zarr.storage import BaseStore
ImportError: cannot import name 'BaseStore' from 'zarr.storage' (/nix/store/5s51ds7p5nnhgxgryyhq5h00gz9hid98-python3.12-zarr-3.0.4/lib/python3.12/site-packages/zarr/storage/__init__.py)

doronbehar avatar Feb 24 '25 14:02 doronbehar

WIP in #108

thewtex avatar Feb 25 '25 02:02 thewtex

+1 hopefully zarr v3 will be supported soon

folterj avatar Apr 16 '25 14:04 folterj

Zarr-Python 3 resolved in #108

thewtex avatar Aug 06 '25 16:08 thewtex

Thanks!

doronbehar avatar Aug 06 '25 16:08 doronbehar