Sören Wacker
Sören Wacker
I miss the ionization mode in the parquet format. Did you consider not storing the intensities and masses as arrays but exploding them? I find the data much easier to...
Lol, I am really happy for this package. However, I just made the mistake and unzipped the file in my home directory. It will take me a while to clean...
Hi, I made a quick benchmark with some metabolomics files and measured the read speed of various formats. For some reason I get the worst performance with mzMLb format. I...
### Version of Apptainer What version of Apptainer (or Singularity) are you using? Run apptainer version 1.2.5 ### Expected behavior ``` Bootstrap: docker From: condaforge/miniforge3:latest %files environment.yaml /environment.yaml requirements.txt /requirements.txt...
  These graphs should be connected, as they are the same chemical structure.
https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:26986
https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI%3A13389
Hi, following up my email conversation with @amalik01. I created this tool to mine the ChEBI graph and identified some problematic Nodes/Edges. And suggested to remove some of them. Apparently...
Hi, I am the author of this application for metabolomics: https://mint.resistancedb.org/ https://lewisresearchgroup.github.io/ms-mint-app/ I need some functionality to explore data files a bit, to verify they have data, look at tht...