No input genome detected, program exited! using costumized grouping
I tried MetaCHIP with five samples. I have the bins in a single folder BRbins, and customized grouping like this RC_V,RC_V.bin.7 RC_V,RC_V.bin.8 RC_V,RC_V.bin.9 RC_VI,RC_VI.bin.10 RC_VI,RC_VI.bin.11 ... ...
The bins are in fasta format, but when i try the first step, using this command: MetaCHIP PI -p Bioreactor -g customized_grouping2.txt -t 12 -i BRbins -x fasta it sends this message: No input genome detected, program exited! and NOTHING MORE!!
When I tried the example it ran well and gives the plots, but not with my bins
Could you help me please?
Hi there,
I doubt the exact suffix you named is not fasta. You can try to examine the situation by using fa as an alternative argument of the option -x.
Best.