solgenomics
Multi-Trial Upload: fails with location codes
Expected Behavior
This earlier PR added the ability to use the location abbreviation/code instead of the full name for the location in the multi-trial upload.
The upload now silently fails (says the trials were added successfully but are not added to the database) if one or more trials use the location abbreviation/code in the location column. The upload plugin correctly validates the location code, but the additional location check in the upload_multiple_trial_design.pl script fails.
It might be a good idea to remove the location check in the perl script, since it's already being done by the plugin validation.
For Bugs:
Environment
Steps to Reproduce
The upload plugin is correctly replacing the location codes with the correct location name and returning that in the parsed data. However, the perl script is re-reading the original file and not using the parsed data from the plugin.