sgn icon indicating copy to clipboard operation
sgn copied to clipboard

Error when creatig a field design on Cassavabase

Open lukasmueller opened this issue 2 years ago • 4 comments

Expected Behavior

FromPrasad: We got error on cassavabase when trying to design the trial (Alpha lattice) for multiple locations 11:12 I checked the error log it was showing “package ‘agricolae’ was built under R version 4.1.2 Error in alpha$book : object of type ‘closure’ is not subsettable Execution halted” message

For Bugs:

Environment

Steps to Reproduce

lukasmueller avatar Aug 29 '22 13:08 lukasmueller

similar to #4146

Updating to R 4.2 fixed it but then caused problems with the NIRS upload outlier visualization. I think what worked best was reinstalling agricolae and any other individual packages that give errors

bellerbrock avatar Aug 29 '22 15:08 bellerbrock

Need to upgrade R version to 4.2 for all dependencies.

lukasmueller avatar Aug 29 '22 18:08 lukasmueller

I added a branch for Debian 11 with R version 4.2. Packages were built on Debian 11 with R 4.2 based on 4.1.2 libs on a day 08/30/2022, with a full dependencies flag.

https://github.com/solgenomics/R_libs/tree/topic/debian_bullseye_R4.2

darekbienkowski avatar Aug 31 '22 16:08 darekbienkowski

Test the new version and it will be ready to close the issue

MFlores2021 avatar Sep 01 '22 15:09 MFlores2021

Seems to have solved the issue, closing this ticket.

lukasmueller avatar Sep 20 '22 18:09 lukasmueller